Jb. Thoden et al., Human UDP-galactose 4-epimerase - Accommodation of UDP-N-acetylglucosaminewithin the active site, J BIOL CHEM, 276(18), 2001, pp. 15131-15136
UDP-galactose 4-epimerase catalyzes the interconversion of UDP-galactose an
d UDP-glucose during normal galactose metabolism. One of the key structural
features in the proposed reaction mechanism for the enzyme is the rotation
of a 4'-ketopyranose intermediate within the active site pocket. Recently,
the three-dimensional structure of the human enzyme with bound NADH and UD
P-glucose was determined, Unlike that observed for the protein isolated fro
m Escherichia coil, the human enzyme can also turn over UDP-GlcNAc to UDP-G
alNAc and vice versa, Here we describe the three-dimensional structure of h
uman epimerase complexed with NADH and UDP-GlcNAc. To accommodate the addit
ional N-acetyl group at the C2 position of the sugar, the side chain of Asn
-207 rotates toward the interior of the protein and interacts with Glu-199,
Strikingly, in the human enzyme, the structural equivalent of Tyr-299 in t
he E, coli protein is replaced with a cysteine residue (Cys-307) and the ac
tive site volume for the human protein is calculated to be similar to 15% l
arger than that observed for the bacterial epimerase, This combination of a
larger active site cavity and amino acid residue replacement most likely a
ccounts for the inability of the E, coil enzyme to interconvert UDP-GlcNAc
and UDP-GalNAc.