Anthropogenic perturbations to the global nitrogen (N) cycle now exceed tho
se to any other major biogeochemical cycle on Earth, yet our ability to pre
dict how ecosystems will respond to the rapidly changing N cycle is still p
oor. While northern temperate forest ecosystems have seen the greatest chan
ges in N inputs from the atmosphere, other biomes, notably semi-arid and tr
opical regions of the globe, are now experiencing increases in N deposition
. These systems are even less well understood than temperate forests, and a
re likely to respond to excess N in markedly different ways. Here, we prese
nt a new integrated terrestrial biophysics-biogeochemical process model, Te
rraFlux, and use this model to test the relative importance of factors that
may strongly influence the productivity response of both humid tropical an
d semi-arid systems to anthropogenic N deposition. These include hydrologic
al losses of dissolved inorganic and organic N, as well as multiple nutrien
t interactions with deposited inorganic N along the hydrological pathway. O
ur results suggest that N-rich tropical forests may have reduced productivi
ty following excess N deposition. Our simulations of semi-arid systems show
increases in productivity following N inputs if water availability is suff
icient and water losses are moderate. The most important model controls ove
r the carbon cycle response in each simulation were interactions that are n
ot represented in the most common terrestrial ecosystem models. These inclu
de parameters that control soil solute transport and nutrient resorption by
plants. Rather than attempt prognostic simulations, we use TerraFlux to hi
ghlight a variety of ecological and biogeochemical processes that are poorl
y understood but which appear central to understanding ecosystem response t
o excess N.