F. Stauffer et al., Inhibition studies of porphobilinogen synthase from Escherichia coli differentiating between the two recognition sites, CHEMBIOCHEM, 2(5), 2001, pp. 343-354
Porphobilinogen synthase condenses two molecules of 5-amino-levulinate in a
n asymmetric way. This unusual transformation requires a selective recognit
ion and differentiation between the :substrates ending up in the A site or
in the P site of porphobilinogen synthase. Studies of inhibitors based on t
he key intermediate first postulated by Jordan allowed differentiation of t
he two recognition sites. The P site, whose structure is known from X-ray c
rystallographic studies, tolerates ester functions well. The A site interac
ts very strongly with nitro groups, but is not very tolerant to ester funct
ions. This differentiation is a central factor in the asymmetric I handling
of the two identical substrates. Finally, it could be shown nor the keto g
roup of-the,Substrate bound at the A site is not Only essential for the rec
ognition, but that an increase in electrophilicity of-the carbon atom also
increases the inhibition potency considerably. This has important consequen
ces for the recognition process at the A site, whose-exact structure is not
yet known.