Large-scale sequencing efforts are providing new perspectives on similariti
es and differences among species. Sequences encoding nuclear receptor (NR)
transcription factors furnish one striking example of this. The three compl
ete or nearly complete metazoan genome sequences - those of the nematode Ca
enorhabditis elegans, the fruit fly (Drosophila melanogaster) and the human
- reveal dramatically different numbers of predicted NR genes: 270 for the
nematode, 21 for the fruit fly and similar to 50 for the human. Although s
ome classes of NRs present in insects and mammals are also represented amon
g the nematode genes, most of the C. elegans NR sequences are distinct from
those known in other phyla. Questions regarding the evolution and function
of NR genes in nematodes, framed by the abundance and diversity of these g
enes in the C. elegans genome, are the focus of this article.