HIV drug resistance is one of the major limitations in the successful treat
ment of HIV-infected patients using currently available antiretroviral comb
ination therapies. When appropriate, drug susceptibility profiles should be
taken into consideration in the choice of a specific combination therapy.
Guidelines recommending resistance testing in certain circumstances have be
en issued. Many clinicians have access to resistance testing and will incre
asingly use these results in their treatment decisions. In this document, w
e comment on the different methods available, and the relevant issues relat
ing to the clinical application of these tests. Specifically, the following
recommendations can be made: (i) genotypic and phenotypic HIV-1 drug resis
tance analyses can yield complementary information for the clinician. Howev
er, insufficient information currently exists as to which approach is prefe
rable in any particular clinical setting; (ii) when HIV-1 drug resistance t
esting is required, it is recommended that testing be performed on plasma s
amples obtained before starting, stopping or changing therapy, on samples t
hat have a viral load above the detection limit of the resistance test; (ii
i) the panel recommends that genotypic and phenotypic HIV-1 drug resistance
testing for clinical purposes be performed in a certified laboratory under
strict quality control and quality assurance standards; and (iv) the panel
recommends that resistance testing laboratories provide clinicians with re
sistance reports that include a list of drug-related resistance mutations (
genotype) and/or a list of drug-related fold resistance values (phenotype),
with interpretations of each by an experienced virologist. The interpretat
ion of genotypic and phenotypic analysis is a complex and developing scienc
e, and in order to understand HIV-1 drug resistance reports, communication
between the requesting clinician and the expert that interpreted the resist
ance report is recommended.