A. Brandes et al., MULTIPLE REPETITIVE DNA-SEQUENCES IN THE PARACENTROMERIC REGIONS OF ARABIDOPSIS-THALIANA L, Chromosome research, 5(4), 1997, pp. 238-246
Nine repetitive DNA sequences, present in the haploid Arabidopsis thal
iana genome in 7-300 copies, were hybridized in site to metaphase and
interphase chromosomes. Every sequence was detected on ail five chromo
some pairs, but was not evenly dispersed over the genome. Clusters of
signals were found in particular regions of the centromeric heterochro
matin, and each sequence showed a characteristic distribution pattern.
Some sequences hybridized more strongly on different chromosomes, ref
lecting chromosome-specific amplification or the presence of homologou
s sequences. No hybridization signals could be detected on euchromatic
regions. In site hybridization on extended chromatin fibres showed th
at the pAL1 repeats are interrupted by another repetitive DNA sequence
. A cosmid subclone (74A) contained a (GA)(38) microsatellite motif, a
nd hybridization with a (GA) oligonucleotide revealed that most of the
hybridization sites of 74A correspond to the distribution of this mic
rosatellite motif. The results show that the paracentromeric heterochr
omatin of A. thaliana chromosomes is composed not only of the tandemly
arranged 180-bp repeat family pAL1/pAtMr, but also of some other repe
titive sequences, thus giving a better understanding of the organizati
on of sequences at the centromeres of A. thaliana.