The potential energy surfaces of several model atomic glass formers have be
en studied using eigenvector-following techniques. Barrier distributions, c
ooperativity indices, path lengths, and vibrational densities of states (VD
OS) are presented based upon data sets containing more than 250 000 pathway
s in total. We find that rearrangements can usefully be separated into "non
diffusive" processes, which do not change the nearest-neighbor contacts and
"diffusive" processes, which do. We suggest a criterion to separate these
classes: nondiffusive processes are those in which no atoms move more than
a threshold distance. Energy barriers for the two classes of rearrangement
differ much more in the "strong" system (Stillinger-Weber silicon) than in
the "fragile" Lennard-Jones systems. Our results indicate that the system i
s not trapped in a single local minimum below the glass transition temperat
ure, because there are numerous "nondiffusive" rearrangements with low barr
iers still accessible. Disconnectivity graphs for low-energy regions of the
potential energy surface illustrate how the crystal is rapidly located onc
e a critical nucleus is present. Finally, the calculated VDOS show a pronou
nced excess over the Debye density of states in the low-frequency region. T
ransition state searches following the eigenvectors corresponding to these
soft modes converge to low-lying transition states, including some that sep
arate nearly degenerate minima. This result provides support for the hypoth
esis that two-level systems and the boson peak are related.