For several decades, research into the mechanisms of genetic recombination
proceeded without a complete understanding of its cellular function or its
place in DNA metabolism. Many lines of research recently have coalesced to
reveal a thorough integration of most aspects of DNA metabolism, including
recombination. In bacteria, the primary function of homologous genetic reco
mbination is the repair of stalled or collapsed replication forks. Recombin
ational DNA repair of replication forks is a surprisingly common process, e
ven under normal growth conditions. The new results feature multiple pathwa
ys for repair and the involvement of many enzymatic systems. The long-recog
nized integration of replication and recombination in the DNA metabolism of
bacteriophage T4 has moved into the spotlight with its clear mechanistic p
recedents. In eukaryotes, a similar integration of replication and recombin
ation is seen in meiotic recombination as well as in the repair of replicat
ion forks and double-strand breaks generated by environmental abuse. Basic
mechanisms for replication fork repair can now inform continued research in
to other aspects of recombination. This overview attempts to trace the hist
ory of the search for recombination function in bacteria and their bacterio
phages, as well as some of the parallel paths taken in eukaryotic recombina
tion research.