MASSHA - a graphics system for rigid-body modelling of macromolecular complexes against solution scattering data

Citation
Pv. Konarev et al., MASSHA - a graphics system for rigid-body modelling of macromolecular complexes against solution scattering data, J APPL CRYS, 34, 2001, pp. 527-532
Citations number
35
Categorie Soggetti
Physical Chemistry/Chemical Physics
Journal title
JOURNAL OF APPLIED CRYSTALLOGRAPHY
ISSN journal
00218898 → ACNP
Volume
34
Year of publication
2001
Part
4
Pages
527 - 532
Database
ISI
SICI code
0021-8898(200108)34:<527:M-AGSF>2.0.ZU;2-H
Abstract
A program, MASSHA, for three-dimensional rendering and rigid-body refinemen t is presented. The program allows display and manipulation of high-resolut ion atomic structures and low-resolution models represented as smooth envel opes or ensembles of beads. MASSHA is coupled with a computational module t o align structural models of different nature and resolution automatically. The main feature is the possibility for rigid-body refinement of the quate rnary structure of macromolecular complexes. If high- or low-resolution mod els of individual subunits are available, the complex can be constructed on the computer display and refined to rt the experimental solution scatterin g data. MASSHA provides both interactive and automated refinement modes to position subunits in a heterodimeric complex (general case) and in a homodi meric complex with a twofold symmetry axis. Examples of application of the program (running on IBM PC compatible machines under Windows 9x/NT/ 2000) a re given.