Cortico-basal ganglia circuits are organized in parallel channels. Informat
ion flow from functionally distinct cortical areas remains segregated withi
n the striatum and through its direct projections to basal ganglia output s
tructures. Whether such a segregation is maintained in trans-subthalamic ci
rcuits is still questioned. The effects of electrical stimulation of prefro
ntal, motor, and auditory cortex were analyzed in the subthalamic nucleus a
s well as in the striatum of anesthetized rats. In the striatum, cells (n =
300) presenting an excitatory response to stimulation of these cortical ar
eas were located in distinct striatal territories, and none of the cells re
sponded to two cortical stimulation sites. In the subthalamic nucleus, both
prefrontal and motor cortex stimulations induced early and late excitatory
responses as a result of activation of the direct cortico-subthalamic path
way and of the indirect cortico-striato-pallido-subthalamic pathway, respec
tively. Stimulation of the auditory cortex, which does not send direct proj
ection to the subthalamic nucleus, induced only late excitatory responses.
Among the subthalamic responding cells (n = 441), a few received both prefr
ontal and motor cortex (n = 19) or prefrontal and auditory cortex (n = 10)
excitatory inputs, whereas a larger number of cells were activated from bot
h motor and auditory cortices (n = 48). The data indicate that the segregat
ion of cortical information flow originating from prefrontal, motor, and au
ditory cortices that occurred in the striatum is only partly maintained in
the subthalamic nucleus. It can be proposed that the existence of specific
patterns of convergence of information flow from these functionally distinc
t cortical areas in the subthalamic nucleus allows interactions between par
allel channels.