Each summer Adelie penguins breed in large disjunct colonies on ice-free ar
eas around the Antarctic continent. Comprising > 10 million birds, this spe
cies represents a dominant feature of the Antarctic ecosystem. The patchy d
istribution within a large geographical range, natal philopatry and a proba
ble history of refugia, suggest that this species is likely to exhibit sign
ificant genetic differentiation within and among colonies. We present data
from seven microsatellite DNA loci for 442 individuals from 13 locations ar
ound the Antarctic continent. With the exception of one locus, there was no
significant genic or genotypic heterogeneity across populations. Pairwise
F-ST values were low with no value > 0.02. When all colonies were compared
in a single analysis, the overall F-ST value was 0.0007. Moreover, assignme
nt tests were relatively ineffective at correctly placing individuals into
their respective collection sites. These data reveal a lack of genetic diff
erentiation between Adelie penguin colonies around the Antarctic continent,
despite substantial levels of genetic variation. We consider this homogene
ity in terms of the dispersal of individuals among colonies and the size of
breeding groups and discuss our results in terms of the glacial history of
Antarctica.