Hybrid finite-element/molecular-dynamics/electronic-density-functional approach to materials simulations on parallel computers

Citation
S. Ogata et al., Hybrid finite-element/molecular-dynamics/electronic-density-functional approach to materials simulations on parallel computers, COMP PHYS C, 138(2), 2001, pp. 143-154
Citations number
55
Categorie Soggetti
Physics
Journal title
COMPUTER PHYSICS COMMUNICATIONS
ISSN journal
00104655 → ACNP
Volume
138
Issue
2
Year of publication
2001
Pages
143 - 154
Database
ISI
SICI code
0010-4655(20010801)138:2<143:HFA>2.0.ZU;2-P
Abstract
A hybrid simulation approach is developed to study chemical reactions coupl ed with long-range mechanical phenomena in materials. The finite-element me thod for continuum mechanics is coupled with the molecular dynamics method for an atop-is system that embeds a cluster of atoms described quantum-mech anically with the electronic density-functional method based on real-space multigrids. The hybrid simulation approach is implemented on parallel compu ters using both task and spatial decompositions. Additive hybridization and unified finite-element/molecular-dynamics schemes allow scalable parallel implementation and rapid code development, respectively. A hybrid simulatio n of oxidation of Si(111) surface demonstrates seamless coupling of the con tinuum region with the classical and the quantum atomic regions. (C) 2001 E lsevier Science B.V All rights reserved.