J. Stefanovic et Cc. Pantelides, Molecular dynamics as a mathematical mapping. III. Efficient evaluation of the differentiable force functions and their derivatives, MOL SIMULAT, 26(5), 2001, pp. 323-352
The fully continuous and differentiable framework for performing molecular
dynamics calculations introduced in parts I and II of this paper [1,2] requ
ires the evaluation of rather complex force functions and their spatial par
tial derivatives. This paper presents an efficient interpolation scheme for
the evaluation of these quantities over a finite spatial domain.
The modified force function is approximated by a linear combination of Herm
ite cubic basis functions such that both the interpolant of the force and i
ts spatial derivatives are continuous across the grid boundaries. In order
to achieve better accuracy for a given grid size, a nonuniform rectilinear
grid is constructed via iterative refinement procedure. The latter guarante
es the accuracy of the force computed by interpolation within any specified
tolerance epsilon > 0.
For many potential functions of practical interest, it is possible for poly
nomial interpolants to be constructed for parts of the force functions whic
h are independent of the potential parameters and system density (the so-ca
lled "separable force functions"). In such cases, a single interpolation gr
id which is applicable for a wide range of potential parameters and system
densities can be constructed a priori.