RNA editing determines receptor kinetics and permeability of glutamate
receptors. This post-transcriptional modification alters single nucle
otides within an RNA transcript changing the codon specified by the ge
nome resulting in the incorporation of a different amino acid, profoun
dly affecting the properties of the protein subunit. We have studied t
he three sites subject to RNA editing within the kainate-specific subu
nit GluR6 in the mammalian hippocampus to determine developmental chan
ges and cell-specific variation in editing. GluR6, when measured in th
e whole rat hippocampus, is predominantly expressed in the unedited fo
rm at E18, with a gradual progression to the edited form during the 1s
t post-natal week, and remains stable from P8 through 30 months. Indiv
idual neurons from P0 through P8 rat hippocampal slices analyzed with
single-cell PCR show predominant expression of fully edited GluR6, unl
ike the population profile. In contrast, single astrocytes from P0 hip
pocampal cultures show that the most common variant is partially edite
d. Thus, editing in neurons and glia differs, and this difference acco
unts for part of the disparity between single-neuron and whole-hippoca
mpus data. Editing in astrocytes is affected by conditions in the exte
rnal environment, as purified astrocytes fail to edit GluR6, although
editing occurs in astrocytes from hippocampal cultures. The homogeneit
y of GluR6 editing between species was also determined by comparing ed
iting in avians and mammals. Genomic and cDNA analysis of chick glutam
ate receptors demonstrates avian editing of GluR2 but not GluR6.