Fundamental to the process of mammalian development is the timed and coordi
nated regulation of gene expression. This requires transcription of a preci
se subset of the total complement of genes. It is clear that chromatin arch
itecture plays a fundamental role in this process by either facilitating or
restricting transcription factor binding [1]. How such specialized chromat
in structures are established to regulate gene expression is poorly underst
ood. All eukaryotic organisms contain specialized histone variants with dis
tinctly different amino acid sequences that are even more conserved than th
e: major core histones [2]. On the basis of their highly conserved sequence
, histone variants have been assumed critical for the function of mammalian
chromatin; however, a requirement for a histone variant has not been shown
in mammalian cells. Mice with a deletion of H1 degrees have been generated
by gene targeting in ES cells, but these mice show no phenotypic consequen
ces, perhaps due to redundancy of function [3]. Here we show for the first
time that a mammalian histone variant, H2A.Z, plays a critical role in earl
y development, and we conclude that this histone variant plays a pivotal ro
le in establishing the chromatin structures required for the complex patter
ns of gene expression essential for normal mammalian development.