Effective object recognition for automated counting of colonies in Petri dishes (automated colony counting)

Citation
J. Marotz et al., Effective object recognition for automated counting of colonies in Petri dishes (automated colony counting), COMPUT M PR, 66(2-3), 2001, pp. 183-198
Citations number
16
Categorie Soggetti
Multidisciplinary
Journal title
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE
ISSN journal
01692607 → ACNP
Volume
66
Issue
2-3
Year of publication
2001
Pages
183 - 198
Database
ISI
SICI code
0169-2607(200109)66:2-3<183:EORFAC>2.0.ZU;2-G
Abstract
Determination of the number of colonies (colony forming units, CFU) is a st andard method in microbiological analysis to ensure the quality of drinking water. Normally this tedious work is still performed manually, A PC-based method for the automated counting of digitized images of Petri dishes is pr esented. The method includes highly specific and effective object recogniti on algorithms that ensure very high detection accuracy. The processing sequ ence implies internal controls therefore enabling reliable automated evalua tions of series of images. Use of the Fuzzy formalism and the high adaptivi ty of the algorithms lead to an extraordinary user-friendliness. For digiti zation different devices like flatbed scanners or CCD-cameras can be used. Due to the highly adaptive algorithms samples from the routine standard pre paration process in laboratories can be evaluated. The accuracy and quality of the method aim at advancement in objectivity of colony counting and qua lity control and assurance. The algorithms and the evaluation of the method are presented. (C) 2001 Elsevier Science Ireland Ltd. All rights reserved.