mROC: a computer program for combining tumour markers in predicting disease states

Citation
A. Kramar et al., mROC: a computer program for combining tumour markers in predicting disease states, COMPUT M PR, 66(2-3), 2001, pp. 199-207
Citations number
10
Categorie Soggetti
Multidisciplinary
Journal title
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE
ISSN journal
01692607 → ACNP
Volume
66
Issue
2-3
Year of publication
2001
Pages
199 - 207
Database
ISI
SICI code
0169-2607(200109)66:2-3<199:MACPFC>2.0.ZU;2-L
Abstract
Receiver operating characteristic (ROC) curves are limited when several dia gnostic tests are available, mainly due to the problems of multiplicity and inter-relationships between the different tests. The program presented in this paper uses the generalised ROC criteria, as well as its confidence int erval, obtained from the non-central F distribution, as a possible solution to this problem. This criterion corresponds to the best linear combination of the test for which the area under the ROC curve is maximal. Quantified marker values are assumed to follow a multivariate normal distribution but not necessarily with equal variances for two populations. Other options inc lude Box-Cox variable transformations, QQ-plots, interactive graphics assoc iated with changes in sensitivity and specificity as a function of the cut- off. We provide an example to illustrate the usefulness of data transformat ion and of how linear combination of markers can significantly improve disc riminative power. This finding highlights potential difficulties with metho ds that reject individual markers based on univariate analyses. (C) 2001 El sevier Science Ireland Ltd. All rights reserved.