An automated annotation tool for genomic DNA sequences using GeneScan and BLAST

Authors
Lynn, AM Jain, CK Kosalai, K Barman, P Thakur, N Batra, H Bhattacharya, A
Citation
Am. Lynn et al., An automated annotation tool for genomic DNA sequences using GeneScan and BLAST, J GENETICS, 80(1), 2001, pp. 9-16
Citations number
24
Categorie Soggetti
Molecular Biology & Genetics
Journal title
JOURNAL OF GENETICS
ISSN journal
00221333 → ACNP
Volume
80
Issue
1
Year of publication
2001
Pages
9 - 16
Database
ISI
SICI code
0022-1333(200104)80:1<9:AAATFG>2.0.ZU;2-A
Abstract
Genomic sequence data are often available well before the annotated sequenc e is published. We present a method for analysis of genomic DNA to identify coding sequences using the GeneScan algorithm and characterize these resul tant sequences by BLAST. The routines are used to develop a system for auto mated annotation of genome DNA sequences.