The low molecular weight GTP binding protein Rac is essential to the activa
tion of the NADPH oxidase complex, involved in pathogen killing during phag
ocytosis. In resting cells, Rac exists as a heterodimeric complex with Rho
GDP dissociation inhibitor (Rho-GDI). Two types of interactions exist betwe
en Rac and Rho-GDI: a protein-lipid interaction, implicating the polyisopre
ne of the GTPase, as well as protein-protein interactions. Using the two-hy
brid system, we show that nonprenylated Rac1 interacts very weakly with Rho
-GDI, pointing to the predominant role of protein-isoprene interaction in c
omplex formation. In the absence of this strong interaction, we demonstrate
that three sites of protein-protein interaction, Arg66(Rac)-Leu67(Rac), Hi
s103(Rac), and the C-terminal polybasic region Arg183R(ac)-Lys188(Rac), are
involved and cooperate in complex formation. When Rac1 mutants are prenyla
ted by expression in insect cells, they all interact with Rho-GDI. Rho-GDI
is able to exert an inhibitory effect on the GDP/GTP exchange reaction exce
pt in the complex in which Rac1 has a deletion of the polybasic region (Arg
183Rac-LysI88Rac). This complex is, most likely, held together through prot
ein-lipid interaction only. Although able to function as GTPases, the mutan
ts of Rac1 that failed to interact with Rho-GDI also failed to activate the
NADPH oxidase in a cell-free assay after loading with GTP. Mutant Leu119Ra
c1Gln could both interact with Rho-GDI and activate the NADPH oxidase. The
Racl/Rho-GDI and Rac1(Leu119Gln)/Rho-GDI complexes, in which the GTPases we
re bound to GDP, were found to activate the oxidase efficiently. These data
suggest that Rho-GDI stabilizes Rac in an active conformation, even in the
GDP-bound state, and presents it to its effector, the p67phox component of
the NADPH oxidase.