Separation of yeast mitochondrial complexes by colorless native polyacrylam
ide gel electrophoresis led to the identification of a supramolecular struc
ture exhibiting NADH-dehydrogenase activity. Components of this complex wer
e identified by N-terminal Edman degradation and matrix-assisted laser deso
rption ionization mass spectrometry. The complex was found to contain the f
ive known intermembrane space-facing dehydrogenases, namely two external NA
DH-dehydrogenases Nde1p and Nde2p, glycerol-3-phosphate dehydrogenase Gut2p
, D- and L-lactate-dehydrogenases Dld1p and Cyb2p, the matrix-facing NADH-d
ehydrogenase Ndi1p, two probable flavoproteins YOR356Wp and YPR004Cp, four
tricarboxylic acids cycle enzymes (malate dehydrogenase Mdh1p, citrate synt
hase Cit1p, succinate dehydrogenase Sdh1p, and famarate hydratase Fum1p), a
nd the acetaldehyde dehydrogenase Ald4p. The association of these proteins
is discussed in terms of NADH-channeling.