Electron microscopy was used in macaque monkey cortical area V1 to investig
ate what factors might determine the proportion of somatic membrane covered
by inhibitory type 2 synapses. In a sample of 4654 excitatory neurons, syn
apse cover did not correlate consistently with cell variety (pyramid or spi
ny stellate), soma size, synaptic apposition length or thalamic input. Ther
e were significant differences in somatic synapse cover per layer, but the
pattern of differences in cover among layers differed significantly between
animals, suggesting that laminar environment alone is not a generally appl
icable determinant of amount of inhibitory synapse cover. The pattern of co
ver for cells in different layers was, however, similar between the two hem
ispheres of an individual monkey. Measures of inhibitory synapse cover on f
our sets of pyramidal neurons in layers 5 and 6, each with different effere
nt projection targets, showed that the sets differed significantly from oth
er cells in their respective layers, and differed significantly from each o
ther. These findings demonstrate that there is unique circuitry for differe
nt subsystems within single layers of cortex and provide a rationale for th
e rich variety of cortical GABAergic interneurons within single layers.