In the present study, we have investigated the in vivo and in vitro role of
two newly identified variants (G-(944)A and A-C-1180) located in the upstr
eam promoter region of the apolipoprotein C-III (apoC-III) gene. These vari
ants were studied in 30 probands diagnosed with FCHL, their relatives, and
spouses. The allele frequencies of both variants were not different between
the groups. No significant associations between plasma lipid traits and DN
A variants were observed. We further analyzed the effect of the presence of
these variants in the upstream enhancing region of the apoC-III gene, as f
ive different in vivo occurring haplotypes, on the transcriptional activity
of apoC-III in both HepG2 and Caco-2 cells. All five promoter constructs,
including the wild type, showed similar enhancing activity of the apoC-III
gene. The average transcription efficiency was enhanced 19-fold in HepG2 ce
lls and 11-fold in Caco-2 cells. Previous studies have shown in vitro insul
in-dependent downregulation of the apoC-III gene transcription in HepG2 cel
ls by DNA variation in an insulin response element (IRE) in the apoC-III pr
omoter. We observed a 30% insulin-dependent down-regulation of apoC-III exp
ression that was, however, independent of the presence of the two IRE varia
nts. In contrast, in Caco-2 cells, a more variable insulin-dependent up-reg
ulation was found that was also independent of the presence of the ERE vari
ants. In conclusion, our data suggested that the apoC-III gene transcriptio
n in vitro is regulated by insulin but independent of the presence of the t
wo IRE variants at -455 and -482. We were unable to detect associations bet
ween these apoC-III variants and plasma lipids and insulin in our FCHL popu
lation. This means that in vivo apoC-III transcription not only depends upo
n insulin but appears to be mediated by other mechanisms.