We have identified a nuclear-encoded Hb from plants (GLB3)that has a centra
l domain similar to the "truncated" Hbs of bacteria, protozoa, and algae. T
he three-dimensional structure of these Hbs is a 2-on-2 arrangement of alph
a -helices, distinct from the 3-on-3 arrangement of the standard globin fol
d [Pesce, A., Couture, M Dewilde, S., Guertin, M., Yamauchi, K.,Ascenzi, P.
, Moens, L. & Bolognesi, M. (2000) EMBOJ. 19, 2424-2434]. GLB3-like genes a
re not found in animals or yeast, but our analysis reveals that they are pr
esent in a wide range of Angiosperms and a Bryophyte. Although cyanobacteri
a and Chlamydomonas have 2-on-2 Hbs (GLBN), GLB3 is more likely related to
GLBO-type 2-on-2 Hbs from bacteria. Consequently, GLB3 is unlikely to have
arisen from a horizontal transfer between the chloroplast and nuclear genom
es. Arabidopsis thaliana GLB3 protein exhibits unusual concentration-indepe
ndent binding Of O-2 and CO. The absorbance spectrum of deoxy-GLB3 is uniqu
e; the protein forms a transient six-coordinate structure after reduction a
nd deoxygenation, which slowly converts to a five-coordinate structure. In
A. thaliana, GLB3 is expressed throughout the plant but responds to none of
the treatments that induce plant 3-on-3 Hbs. Our analysis of the sequence,
ligand interactions, and expression profile of GLB3 indicates that this pr
otein has unique biochemical properties, evolutionary history, and, most li
kely, a function distinct from those of other plant Hbs.