The genomic structure and promoter region of the human Parkin gene

Citation
S. Asakawa et al., The genomic structure and promoter region of the human Parkin gene, BIOC BIOP R, 286(5), 2001, pp. 863-868
Citations number
16
Categorie Soggetti
Biochemistry & Biophysics
Journal title
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
ISSN journal
0006291X → ACNP
Volume
286
Issue
5
Year of publication
2001
Pages
863 - 868
Database
ISI
SICI code
0006-291X(20010907)286:5<863:TGSAPR>2.0.ZU;2-9
Abstract
Parkin has been identified as a causative gene of the autosomal recessive j uvenile parkinsonism (AR-JP). In this study, we determined the genomic stru cture of the Parkin gene and identified a core promoter region based on the DNA sequence of 1.4 Mb. The 5'-flanking region contained no apparent TATA or CAAT box elements but several putative cis-elements for various transcri ption factors. The GC- and CpG-rich regions were observed not only in the 5 '-flanking sequence but also in the 5'-part of the first intron of Parkin. We identified an exact starting point of Parkin transcription. A core promo ter region was determined by transfecting a series of deletion constructs w ith a dual luciferase reporter system into human neuroblastoma cells. Furth ermore, we located a neighboring novel gene in a head-to-head direction wit h Parkin with only a 198-bp interval. (C) 2001 Academic Press.