The dynamics of intracellular amino acid pools were determined in batch cul
tures of Saccharomyces cerevisiae. Immediate termination of metabolic activ
ity was found to be necessary for accurate quantification of in vivo concen
trations of intracellular amino acids, due to significant changes in most i
ntracellular amino acid pools observed during extraction without an instant
aneous stop of the metabolism. The method applied to batch-cultures of S. c
erevisiae on glucose revealed complex dynamics in intracellular amino acid
pools. The most drastic changes were observed during the diauxic shift and
at the entry into the stationary phase. Even during phases of exponential g
rowth on glucose and ethanol. cells showed significant variations in intrac
ellular amino acid concentrations. The method presented can be used to inve
stigate the physiology of yeast cultures, including industrially relevant b
atch and fed-batch processes.