A cDNA encoding a Ca-ATPase homologue, designated SMA3, was isolated from a
n adult cDNA library of Schistosoma mansoni. The full-length cloned DNA con
tains a 3105-bp open reading frame that potentially encodes a 1035-amino-ac
id protein with a M-r of 113,729 and a pl of 6,48. Homology searches for SM
A3 reveal high sequence identity with a variety of Ca-ATPases from evolutio
narily diverse organisms. SMA3 is predicted to contain 10 transmembrane reg
ions typical of this protein family as well as other conserved domains, suc
h as the phosphorylation site and FITC binding domain. The greatest sequenc
e identity (40-50%) is found to those Ca-ATPases belonging to the secretory
pathway subclass. Identification of the 5 ' end of the SMA3 cDNA by RACE a
nalysis reveals the presence of a 36-base spliced leader RNA, suggesting th
at the SMA3 pre-mRNA is processed by trans-splicing. Northern analysis reve
als a single dominant transcript of 5 kb in adult RNA preparations. Antibod
ies raised against an amino terminal peptide detect the protein in the adul
t tegument, suggesting that SMA3 functions to help control Ca homeostasis w
ithin the tegument and may play a role in signal transduction at the host p
arasite interface. (C) 2001 Academic Press.