Mathematical models of plant-virus disease epidemics were developed where c
ross protection occurs between viruses or virus strains. Such cross protect
ion can occur both naturally and through artificial intervention. Examples
of diseases with continuous and discontinuous crop-host availability were c
onsidered: citrus tristeza and barley yellow dwarf, respectively. Analyses
showed that, in a single host population without artificial intervention, t
he two categories of host plants, infected with a protecting virus alone an
d infected with a challenging virus, could not coexist in the long term. Fo
r disease systems with continuous host availability, the virus (strain) wit
h the higher basic reproductive number (R-0) always excluded the other even
tually; whereas, for discontinuous systems, R-0 is undefined and the virus
(strain) with the larger natural transmission rate was the one that persist
ed in the model formulation. With a proportion of hosts artificially inocul
ated with a protecting mild virus, the disease caused by a virulent virus c
ould be depressed or eliminated, depending on the proportion. Artificial in
oculation may be constant or adjusted in response to changes in disease inc
idence. The importance of maintaining a constant level of managed cross pro
tection even when the disease incidence dropped was illustrated. Investigat
ions of both pathosystem types showed the same qualitative result: that man
aged cross protection need not be 100% to eliminate the virulent virus (str
ain). In the process of replacement of one virus (strain) by another over t
ime, the strongest competition occurred when the incidence of both viruses
or virus strains was similar. Discontinuous crop-host availability provided
a greater opportunity for viruses or virus strains to replace each other t
han did the more stable continuous cropping system. The process by which on
e Barley yellow dwarf virus replaced another in New York State was illustra
ted.