N. Baeyens et al., Structural modifications in the membrane-bound regions of the gastric H+/K+-ATPase upon ligand binding, EUR J BIOCH, 268(19), 2001, pp. 5135-5141
Extensive trypsin proteolysis was used to examine the accessibility of memb
rane bound segments of the gastric H+/K+-ATPase under different experimenta
l conditions known to induce either the E1 or the E2 conformation. Membrane
-anchored peptides were isolated after trypsinolysis and identified by sequ
encing. We show that several membrane bound segments are involved in the co
nformational change. In the N-terminal region, a M1-M2 peptide (12 kDa) was
found to be associated with the membrane fraction after digestion in the p
resence of K+ or in the presence of vanadate (12 kDa. and 15 kDa). In the M
3 and M4 region, no difference was observed for the peptide obtained in E1
or E2-K conformations, but the peptide generated in the presence of vanadat
e begins 12 amino-acid residues earlier in the sequence. Cytoplasmic loop r
egion: we show here that a peptide beginning at Asp574 and predicted to end
at Arg693 is associated with the membrane for a vanadate-induced conformat
ion. In the M5-M6 region, the membrane-anchored peptide obtained on E1 is 3
9 amino acids shorter than the E2 peptide. In the M7-M8 region, the same pe
ptide encompassing the M7 and M8 transmembrane segments was produced for E1
and E2 conformations.