Construction and characterization of a bovine BAC library with four genome-equivalent coverage

Citation
A. Eggen et al., Construction and characterization of a bovine BAC library with four genome-equivalent coverage, GEN SEL EVO, 33(5), 2001, pp. 543-548
Citations number
13
Categorie Soggetti
Animal Sciences
Journal title
GENETICS SELECTION EVOLUTION
ISSN journal
0999193X → ACNP
Volume
33
Issue
5
Year of publication
2001
Pages
543 - 548
Database
ISI
SICI code
0999-193X(200109/10)33:5<543:CACOAB>2.0.ZU;2-3
Abstract
A bovine artificial chromosome (BAC) library of 105 984 clones has been con structed in the vector pBeloBAC11 and organized in 3-dimension pools and hi gh density membranes for screening by PCR and hybridization. The average in sert size, determined after analysis of 388 clones, was estimated at 120 kb corresponding to a four genome coverage. Given the fact that a male was us ed to construct the library, the probability of finding any given autosomal and X or Y locus is respectively 0.98 and 0.86. The library was screened f or 164 microsatellite markers and an average of 3.9 superpools was positive for each PCR system. None of the 50 or so BAC clones analysed by FISH was chimeric. This BAC library increases the international genome coverage for cattle to around 28 genome equivalents and extends the coverage of the rumi nant genomes available at the Inra resource center to 15 genome equivalents .