Spatial autocorrelation analyses of 12 allozyme loci were used to compare g
enetic structure within populations of two varieties of Pinus clausa. P. cl
ausa var. immuginata populations tend to be uneven-aged, with continuous re
cruitment in small gaps created by wind damage, whereas P. clausa var. clau
sa populations are more even-aged, with recruitment postdating periodic can
opy fires. Three var. immuginata populations and three matched pairs of var
. clausa populations, including both a mature and a nearby recently burned
population, were examined. Aggregation of multilocus genotypes at small dis
tances was evident in all young var. clausa populations. Little inbreeding
was apparent among juveniles or adults in these populations; their genetic
structure is likely to have resulted from limited seed dispersal. Genotypes
were not significantly spatially structured in nearby matched mature popul
ations. Genetic structure was less evident in var. immuginata populations.
Aggregated genotypes were only apparent in the population where patches inc
luded juveniles of similar ages; dense juvenile clumps in the other two var
. immuginata populations comprised a variety of ages. Interannual variabili
ty in allele frequencies of surviving seedlings may account for the absence
of genetic structure in these populations.