P. Seghieri et al., A MINIMAL MODEL FOR CALCIUM SIGNAL GENERATED BY TYROSINE KINASE AND G-PROTEIN LINKED RECEPTORS - A STOCHASTIC COMPUTER-SIMULATION WITH CALSIM, International journal of medical informatics, 46(1), 1997, pp. 53-65
Citations number
38
Categorie Soggetti
Information Science & Library Science","Medical Informatics
A software was designed to simulate the calcium signal following hormo
ne or growth factor stimulation in epithelial cells. The software writ
ten in C runs on a PC under Windows environment. It is based on a Mark
ov process where the dynamic of the system is characterised by phenome
nological transition probabilities. Moreover a minimal model is propos
ed to analyse the role of plasma channels and IP3 receptors, together
with the opposite action of the CaATPase pumps, in the cytosolic and e
ndoplasmic reticulum (ER) calcium signal control. The simulation is ap
plied on the calcium response following stimulation by carbacol (prote
in G coupled receptors) or epidermal growth factor (tyrosine kinase ty
pe receptors) in A431 epithelial cells. The experimental calcium signa
ls can be grouped in three classes; a spike and a return to the basal
level (signal A), a spike and a decrease to a plateau level (signal B)
or a slow increase to a plateau (signal C). Epidermal growth factor i
nduces signal A and B while carbacol gives signal B and C. When a 'pse
udo' steady state is reached oscillations occur. Computer simulations
show that signal A can result from the activation of IP3 receptors whi
le signal C would result from the activation of the plasma channels, s
ignal B appears as the additive contribution of both channels, while o
scillations are compatible with a calcium induced calcium release mech
anism. Simulations suggest that the calcium dynamic in the ER is a mir
ror of cytosolic calcium but that a simple way to produce similar calc
ium elevation in these two compartments is to activate plasma channels
. Implications of such a mechanism is discussed. (C) 1997 Elsevier Sci
ence Ireland Ltd.