Ma. Tito et al., Macromolecular organization of the Yersinia pestis capsular F1 antigen: Insights from time-of-flight mass spectrometry, PROTEIN SCI, 10(11), 2001, pp. 2408-2413
Mass spectrometry has been used to examine the subunit interactions in the
capsular F1 antigen from Yersinia pestis, the causative agent of the plague
. Introducing the sample using nanoflow electrospray from solution conditio
ns in which the protein remains in its native state and applying collisiona
l cooling to minimize the internal energy of the ions, multiple subunit int
eractions have been maintained. This methodology revealed assemblies of the
Fl antigen that correspond in mass to both 7-mers and 14-mers, consistent
with interaction of two seven-membered units. The difference between the ca
lculated masses and those measured experimentally for these higher-order ol
igomers was found to increase proportionately with the size of the complex.
This is consistent with a solvent-filled central cavity maintained on asso
ciation of the 7-mer to the 14-mer. The charge states of the ions show that
an average of one and four surface accessible basic side-chains are involv
ed in maintaining the interactions between the 7-mer units and neighboring
subunits, respectively. Taken together, these findings provide new informat
ion about the stoichiometry and packing of the subunits involved in the ass
embly of the capsular antigen structure. More generally, the data show that
the symmetry and packing of macromolecular complexes can be determined sol
ely from mass spectrometry, without any prior knowledge of higher order str
ucture