Intercalators are the most important group of compounds that interact rever
sibly with the DNA double helix. Some of them are valuable drugs currently
used for the treatment of ovarian and breast cancers and acute leukemias, w
hile many others are in different phases of clinical trials.
Intercalating agents share common structural features such as the presence
of planar polyaromatic systems which bind by insertion between DNA base-pai
rs, with a marked preference for 5'-pyrimidine-purine-3' steps. The chromop
hores are linked to basic chains that might also play an important role in
the affinity and selectivity shown by these compounds. Bisintercalators hav
e two potential intercalating ring systems connected by linkers which can v
ary in length and rigidity.
Nowadays it is well accepted that the antitumor activity of intercalators i
s closely related to the ability of these compounds to stabilize the DNA- i
ntercalator-topoisomerase II ternary complex. In this work we have carried
out a revision of small organic molecules that bind to the DNA molecule via
intercalation, and exert their antitumor activity through a proven topoiso
merase II inhibition. We have tried to give a general overview of the most
recent results in this area, paying special attention to compounds that arc
currently under clinical trials. Among those are naphthalimides, a group o
f compounds that has been developed in our laboratory since the 70's.