Jg. De La Torre et al., HYDROMIC: prediction of hydrodynamic properties of rigid macromolecular structures obtained from electron microscopy images, EUR BIOPHYS, 30(6), 2001, pp. 457-462
Citations number
27
Categorie Soggetti
Biochemistry & Biophysics
Journal title
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS
We have developed a procedure for the prediction of hydrodynamic coefficien
ts and other solution properties of macromolecules and macromolecular compl
exes whose volumes have been generated from electron microscopy images. Sta
rting from the structural files generated in the three-dimensional reconstr
uctions of such molecules, it is possible to construct a hydrodynamic model
for which the solution properties can be calculated. We have written a com
puter program, HYDROMIC, that implements all the stages of the calculation.
The use of this procedure is illustrated with a calculation of the solutio
n properties of the volume of the cytosolic chaperonin CCT, obtained from c
ryoelectron microscopy images.