Cyclooxygenases (COX)-1 and -2 are the key enzymes in the conversion of ara
chidonic acid to prostaglandins. COX-2 appears to play an emerging role in
inflammation and carcinogenesis. Nonsteroidal anti-inflammatory drugs (NSAI
Ds) are used for the treatment of numerous diseases and reduce the risk of
developing colorectal cancer. Polymorphisms in the COX-2 gene could alter e
nzyme expression, function, and/or the response to NSAIDs. Therefore, they
could modify individual risks for developing cancer and other diseases or t
he occurrence of side effects or sensitivity toward selective or nonselecti
ve COX inhibitors. We sequenced the COX-2 gene of 72 individuals and identi
fied rare polymorphisms in the promoter and the coding region. A COX-2 mole
cular model was used to locate the coding region polymorphisms relative to
functional sites in the protein, and the COX-2 V511A polymorphism was very
near to the active site. This variant protein was expressed, and function w
as evaluated, but no difference was detected in metabolism of the COX-2 sub
strates, arachidonic acid, linoleic acid, and 2-arachidonyl glycerol, compa
red with the wild type. The K-m values for arachidonic acid showed no diffe
rences between the COX-2 wild type and V511A mutant. Inhibition with select
ive or nonselective COX inhibitors was essentially the same for the two enz
ymes. The absence of functionally important polymorphisms in the COX-2 gene
may suggest that there has been selective pressure against those single nu
cleotide polymorphisms because of the critical role of this enzyme in maint
enance of homeostasis.