The evolution of the endosymbiont Buchnera during its adaptation to intrace
llular life involved a massive reduction in its genome. By comparing the or
thologous genes of Buchnera, Escherichia coli and Vibrio cholerae, we show
that the minimal genome size of Buchnera arose from multiple events of gene
disintegration dispersed over the whole genome. The elimination of the gen
es was a continuous process that began with gene inactivation and progresse
d until the DNA corresponding to the pseudogenes were completely deleted.