This review focuses on some recent advances in realizing microfabricated ca
pillary array electrophoresis (mu CAE). In particular, the development of a
novel rotary scanning confocal fluorescence detector has facilitated the h
igh-speed collection of sequencing and genotyping data from radially format
ted mu CAE devices. The concomitant development of a convenient energy-tran
sfer cassette labeling chemistry allows sensitive multicolor labeling of an
y DNA genotyping or sequencing analyte. High-performance hereditary haemoch
romatosis and short tandem repeat genotyping assays are demonstrated on the
se devices along with rapid mitochondrial DNA sequence polymorphism analysi
s. Progress in supporting technology such as robotic fluid dispensing and b
atched data analysis is also presented. The ultimate goal is to develop a p
arallel analysis platform capable of integrated sample preparation and auto
mated electrophoretic analysis with a throughput 10-100 times that of curre
nt technology.