Spanish Churra sheep were studied in a daughter design for the presence on
chromosome 6 of quantitative trait loci (QTL) influencing milk production t
raits. Eight half-sib families were genotyped for 11 microsatellites and ma
rker-QTL effects analysed using yield deviations (YD) as quantitative measu
rements for the following traits: milk yield, protein yield, and protein pe
rcentage. QTL analysis was performed by interval mapping based on multimark
er regression principles. Significance thresholds were estimated through a
permutation test followed by a correction for multiple testing. The results
suggest a region on ovine chromosome 6, close to the casein cluster, with
an influence on milk traits and particularly on protein percentage. These r
esults, the first ones reported for QTL affecting milk traits in sheep, are
discussed in relation to data available for cattle, a closely related spec
ies.