The insertion site localization of the 412 retrotransposable element w
as analysed by in situ hybridization to the polytene chromosomes of 57
individual genomes from 25 natural populations of Drosophila simulans
. Tile 412 insertion sites along the chromosomes show a tendency to ag
gregate in the distal and proximal ends of the 2R arm, and in several
local regions along the 3R arm. The distribution of the 412 insertion
sites, weighted by DNA content: along the chromosome arms reveals an o
verall tendency for the site number to increase from the middle of the
arm to the base and tip, with a decrease at the tips, especially pron
ounced for the X chromosome. Such a distribution differs slightly from
that of D. melanogaster, which globally shows an increase of the 412
site number from base to tip of the chromosome arms, indicating differ
ing behaviour of the 412 element in the two species. These results are
discussed in connection with the recombination rate along the chromos
ome arms.