A dipolar coupling based strategy for simultaneous resonance assignment and structure determination of protein backbones

Citation
F. Tian et al., A dipolar coupling based strategy for simultaneous resonance assignment and structure determination of protein backbones, J AM CHEM S, 123(47), 2001, pp. 11791-11796
Citations number
37
Categorie Soggetti
Chemistry & Analysis",Chemistry
Journal title
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
ISSN journal
00027863 → ACNP
Volume
123
Issue
47
Year of publication
2001
Pages
11791 - 11796
Database
ISI
SICI code
0002-7863(20011128)123:47<11791:ADCBSF>2.0.ZU;2-T
Abstract
A new approach for simultaneous protein backbone resonance assignment and s tructure determination by NMR is introduced. This approach relies on recent advances in high-resolution NMR spectroscopy that allow observation of ani sotropic interactions, such as dipolar couplings. from proteins partially a ligned in field ordered media. Residual dipolar couplings are used for both geometric information and a filter in the assembly of residues in a sequen tial manner. Experimental data were collected in less than one week on a sm all redox protein, rubredoxin, that was N-15 enriched but not enriched abov e 1% natural abundance in C-13. Given the acceleration possible with partia l 13C enrichment, the protocol described should provide a very rapid route to protein structure determination. This is critical for the structural gen omics initiative where protein expression and structural determination in a high-throughput manner will be needed.