The negative feedback model for gene regulation of the circadian mechanism
is described for the fruitfly, Drosophila melanogaster. The conservation of
function of clock molecules is illustrated by comparison with the mammalia
n circadian system, and the apparent swapping of roles between various cano
nical clock gene components is highlighted. The role of clock gene duplicat
ions and divergence of function is introduced via the timeless gene. The im
pressive similarities in clock gene regulation between flies and mammals co
uld suggest that variation between more closely related species within inse
cts might be minimal. However, this is not borne out because the expression
of clock molecules in the brain of the giant silk moth, Antheraea pernyi,
is not easy to reconcile with the negative feedback roles of the period and
timeless genes. Variation in clock gene sequences between and within fly s
pecies is examined and the role of co-evolution between and clock molecules
is described, particularly with reference to adaptive functions of the cir
cadian phenotype.