C. Huber et al., IN-VITRO SELECTION, STRUCTURAL CHARACTERISTICS, AND PHOTOCLEAVAGE OF AN ISOALLOXAZINE BINDING RNA APTAMER, Nucleosides & nucleotides, 16(5-6), 1997, pp. 717-720
An RNA motif which binds FMN was isolated by in vitro selection of an
RNA library. The secondary structure of this RNA contains an internal
loop forming an isoalloxazine binding site through non-canonical base
pairing. Irradiation with light in presence of FMN induces photocleava
ge at G.U base pairs outside the aptamer binding site.