Locations of light atoms in C6D6 on Ru(0001) have been determined by low en
ergy electron diffraction (LEED) and density functional theory (DFT). For t
he favored site/orientation in the p(root7 x root7-)-R19 degrees phase, we
find alternating outward bowing of the C-D bonds of 24 degrees and 9 degree
s via LEED, and 22 degrees and 14 degrees via DFT. This remarkable agreemen
t gives important cross confirmation of the validity of these techniques in
describing the subtle contributions of light atoms to adsorbate scattering
and energetics. The buckling is explained as a consequence of decreased ar
omaticity induced by the bonding to the substrate.