In this study, we compared genetic instability in 70 breast carcinomas
analyzed by two different methods, cytogenetics and flow cytometry. T
his comparison showed that each method has its strengths and weaknesse
s. Flow cytometry detected aneuploidy in 60% of cases, but missed most
of the cytogenetically near-diploid clones and clones with simple chr
omosomal changes. Cytogenetics revealed chromosomal abnormalities in 5
0% of the samples. Simple chromosomal changes and multiploidy were rea
dily detected by this method, but some of the clones with a high DNA i
ndex: by flow cytometry were missed. The two methods gave correspondin
g results in the majority of cases (54%). In 17 cases, both methods de
tected matching abnormal clones (r = 0.93) but the DNA index was highe
r than predicted by the chromosome numbers. Most of the discrepancies
might be explained by tumor heterogeneity and insufficient numbers of
cells available for cytogenetic analyses. In seven cases, single-cell
abnormalities were found that corresponded to a pow cytometry peak. Mu
lticlonality was present in 25% of aneuploid tumors. No association wa
s found between metaphases in cytogenetic preparations and increased S
-phase fraction of the tumors, but aneuploid tumors had a significantl
y higher proliferation rate. Pooling data from both methods demonstrat
ed that the majority of our samples were aneuploid (74%). (C) 1997 Wil
ey-Liss, Inc.