Fifty-two drainage lakes, located in south-central Ontario, Canada, were ex
amined to study the association of isolation- and environment-related facto
rs with fish community composition. Eight quantitative measures of lake iso
lation were examined, each of which incorporated potential ecological "chal
lenges" that a fish encounters when moving between lakes. A Procrustean app
roach was employed to assess the degree of concordance between fish assembl
age structure, measures of lake isolation and environmental conditions (i.e
., lake morphology and water chemistry). Our results revealed a high concor
dance between patterns in fish community composition and lake isolation and
lake morphology at the watershed scale, suggesting that insular and habita
t-related factors influence the structure of fish communities. At the scale
of the individual lake, this relationship varied greatly, ranging from a s
trong match of community composition with both spatial and abiotic conditio
ns to communities exhibiting weak association with these conditions. Furthe
rmore, we showed that alternative measures of Lake isolation provide additi
onal insight into potential factors shaping patterns in fish community comp
osition; information not provided using straight-line distances between lak
es. Finally, the statistical methodology outlined in this paper provides a
robust technique for assessing both the overall association between multiva
riate data matrices (i.e., landscape or regional scale), as well as facilit
ating the examination of smaller-scale relationships of individual observat
ions (i.e., local scale).