We devised a noninvasive genetic selection strategy to identify positive re
gulators of bacterial virulence genes during actual infection of an intact
animal host. This strategy combines random mutagenesis with a switch-like r
eporter of transcription that confers antibiotic resistance in the off stat
e and sensitivity in the on state. Application of this technology to the hu
man intestinal pathogen Vibrio cholerae identified several regulators of ch
olera toxin and a central virulence gene regulator that are operative durin
g infection. These regulators function in chemotaxis, signaling pathways, t
ransport across the cell envelope, biosynthesis. and adherence. We show tha
t phenotypes that appear genetically independent in cell culture become int
errelated in the host milieu.