Application of the multiensemble sampling to the hydration free energy

Citation
Kk. Han et al., Application of the multiensemble sampling to the hydration free energy, J COMPUT CH, 22(10), 2001, pp. 1004-1009
Citations number
23
Categorie Soggetti
Chemistry
Journal title
JOURNAL OF COMPUTATIONAL CHEMISTRY
ISSN journal
01928651 → ACNP
Volume
22
Issue
10
Year of publication
2001
Pages
1004 - 1009
Database
ISI
SICI code
0192-8651(20010730)22:10<1004:AOTMST>2.0.ZU;2-W
Abstract
We demonstrate the feasibility of using multiensemble sampling method (MESM ) to determine the free energy difference between two far states for which the configurational distributions do not overlap at all. The MESM is a rece ntly developed non-Boltzmann sampling technique. The free energy of chargin g a sodium ion in water is accurately calculated in a single simulation, in troducing nine intermediate ionic states. This is due to the ability of the method to explore the relevant parts of configuration space equally for ev ery state, and this ability comes from the universality of weighting functi on W and the simplicity in adjusting its parameters. Detailed procedures of adjusting the parameters are presented. The comparison with a free energy perturbation method (FEPM) shows that the MESM is more reliable and efficie nt. (C) 2001 John Wiley & Sons, Inc. J Comput Chem 22: 1004-1009, 2001.