Chloropigment distribution and transport on the inner shelf off Duck, North Carolina

The distribution and movement of chloropigments (chlorophylls and associate d degradation products) in the bottom boundary layer near Duck, North Carol ina, were examined during July and August 1994. Time series of chloropigmen t fluorescence, current velocity, and surface wave properties were acquired from instruments mounted on a bottom tripod set at 20 m depth. These data were combined with moored current meter measurements, meteorological data, and shipboard surveys in a comparative assessment of physical processes and chloropigment distribution over a wide range of temporal and spatial scale s. Two dominant scales of chloropigment variation were observed. On numerou s occasions, small-scale (order m) structure in the near-bottom fluorescenc e field was observed, even in the absence of identifiable structure in the temperature and salinity fields. Over larger timescales and space scales, v ariations in fluorescence were related to changes in water mass properties that could be attributed to alternating events of upwelling and downwelling . This view was reinforced by shipboard measurements that revealed correlat ions between fluorescence and hydrographic fields, both of which were modif ied by wind-forced upwelling and downwelling and by the advection of low-sa linity water from Chesapeake Bay. Local resuspension of sediments did not c ontribute appreciably to the near-bottom pigment load seen at the tripod, b ecause of low bottom stress. Estimates of chloropigment flux indicated a ne t shoreward transport of chloropigments in the lower boundary layer. Howeve r, the rapid fluctuations of currents and pigment concentrations gave rise to large and frequent variations in chloropigment fluxes, generating uncert ainty in extrapolations of this finding to longer timescales.