Inventory of the cytochrome P450 superfamily

Citation
A. Archakov et al., Inventory of the cytochrome P450 superfamily, J MOL MODEL, 7(5), 2001, pp. 140-142
Citations number
12
Categorie Soggetti
Chemistry & Analysis",Chemistry
Journal title
JOURNAL OF MOLECULAR MODELING
ISSN journal
16102940 → ACNP
Volume
7
Issue
5
Year of publication
2001
Pages
140 - 142
Database
ISI
SICI code
1610-2940(2001)7:5<140:IOTCPS>2.0.ZU;2-M
Abstract
A non-redundant database of 325 protein sequences of the P450s has been sub jected to cluster analysis. Thresholds for (sub) families have been optimiz ed to minimize the differences between the obtained clusters and nomenclatu re adopted for the P450s. At the given thresholds, approximately 80% of the systematic nomenclature is reproduced by the cluster analysis. The differe nces primarily occur among the CYP4 and CYP6 families, which include cytoch romes P450 of mammalian and insect origin. Conflicts are also encountered a mong plant families and among P450s of Mycobacterium tuberculosis.