Nuclear shrinkage in live mouse hippocampal slices

Brain slices are used extensively for biochemical, electrophysiological and molecular investigations. However, only the time frame for electrophysiolo gical and biochemical investigations has as yet been defined. The goal of t he present study was to investigate the time course of nuclear structure in live brain slices. Hippocampal slices (300 mum) were prepared from male CD 1 mice (25-30 g), stained with Hoechst 33342 (10 muM), calcein-AM (2 muM) a nd ethidium homodimer (4 muM), and imaged with single- and dual-photon micr oscopy. The volume of CAI pyramidal cell nuclei decreased from 759 +/- 229 mum(3) in 40-50 mum depth 25 min after preparation to 453 +/- 169 mum(3) (P <0.001) after 60 min, 315+112 mum(3) (P <0.001) after 120 min and 128 +/- 71 mum(3) (P <0.001) after 8 h. Similar results were obtained on a prolonge d time scale in 70-80 mum depth and with an accelerated time scale in 20-30 mum depth. Live-dead staining showed that cell damage is progressing from the surface to deeper layers of the slices in a time-dependent fashion. We conclude that nuclei of CA1 hippocampal pyramidal cells show a time- and de pth-dependent shrinkage converging 8 h after slice preparation to a volume of 90-130 mum; in any depth between 20 and 80 mum. The nucleus in the super ficial 80 mum of each side appears dysfunctional even at times suitable for electrophysiological and biochemical experimentation in hippocampal slices . Molecular analysis of cell regulation in brain slices may, therefore, be time-dependently distorted by progressing cell death in at least half of th e tissue under investigation.